PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010907664.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family NAC
Protein Properties Length: 245aa    MW: 27608.3 Da    PI: 9.3406
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010907664.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM157.17.4e-49141381128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeelvv+yLk+kv + +l++ ++i+e+d+ k++Pw+Lp    ++e+e yfF  r+ ky++g+r nrat  gyWkatgkdk+vl+ 
  XP_010907664.1  14 LPPGFRFHPTDEELVVQYLKRKVFSCPLPA-SIIPEIDLGKYNPWELP---GGSEQERYFFYLREAKYPNGNRLNRATGCGYWKATGKDKKVLAL 104
                     79****************************.89***************...4578899**********************************987 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      ++++vg+kk+Lvfy+g+ p+g++tdW+mheyrl
  XP_010907664.1 105 rSNQVVGMKKVLVFYHGNPPRGSRTDWIMHEYRL 138
                     57788***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.55E-587173IPR003441NAC domain
PROSITE profilePS5100555.82214173IPR003441NAC domain
PfamPF023655.8E-2615138IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009651Biological Processresponse to salt stress
GO:0009737Biological Processresponse to abscisic acid
GO:0010089Biological Processxylem development
GO:0010150Biological Processleaf senescence
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MDRPSFMRHG VVKLPPGFRF HPTDEELVVQ YLKRKVFSCP LPASIIPEID LGKYNPWELP  60
GGSEQERYFF YLREAKYPNG NRLNRATGCG YWKATGKDKK VLALRSNQVV GMKKVLVFYH  120
GNPPRGSRTD WIMHEYRLAG AETRTGAFPQ RKNSTHFSMV PTKDWVLCRI FKKKRATKMG  180
VDVEEYCEDS QTRNGGIGFI DFMGLRDGSP RSSSPSSSES SCVTEFSDGS SNGDEATCSD  240
SLSPP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A9e-501217815170NO APICAL MERISTEM PROTEIN
1ut4_B9e-501217815170NO APICAL MERISTEM PROTEIN
1ut7_A9e-501217815170NO APICAL MERISTEM PROTEIN
1ut7_B9e-501217815170NO APICAL MERISTEM PROTEIN
3swm_A1e-491217818173NAC domain-containing protein 19
3swm_B1e-491217818173NAC domain-containing protein 19
3swm_C1e-491217818173NAC domain-containing protein 19
3swm_D1e-491217818173NAC domain-containing protein 19
3swp_A1e-491217818173NAC domain-containing protein 19
3swp_B1e-491217818173NAC domain-containing protein 19
3swp_C1e-491217818173NAC domain-containing protein 19
3swp_D1e-491217818173NAC domain-containing protein 19
4dul_A9e-501217815170NAC domain-containing protein 19
4dul_B9e-501217815170NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00507DAPTransfer from AT5G13180Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010907664.10.0PREDICTED: NAC transcription factor 25-like
SwissprotQ9FY931e-79NAC83_ARATH; NAC domain-containing protein 83
TrEMBLB3TLL01e-137B3TLL0_ELAGV; ANAC083 transcription factor
STRINGGSMUA_Achr10P11910_0011e-103(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63173254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.11e-80NAC domain containing protein 83